cocoatree.deconvolution.extract_sectors

cocoatree.deconvolution.extract_sectors(idpt_components, coevo_matrix)[source]

Extract residue positions of sectors

Arguments

idpt_components : independent components obtained from an ICA

coevo_matrix : coevolution matrix

Returns

sectorslists of residue positions on the filtered MSA for each of the

n_components sector

Examples using cocoatree.deconvolution.extract_sectors

Perform full SCA analysis on the S1A serine protease dataset

Perform full SCA analysis on the S1A serine protease dataset