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General examples¶

Contents

  • General examples

    • Datasets

Plot sector together with (phylogenetic) tree and metadata

Plot sector together with (phylogenetic) tree and metadata

The simplest SCA analysis ever

The simplest SCA analysis ever

Mapping original MSA, filtered MSA, PDB, and sectors

Mapping original MSA, filtered MSA, PDB, and sectors

Mutual information versus SCA

Mutual information versus SCA

Perform full SCA analysis on the S1A serine protease dataset

Perform full SCA analysis on the S1A serine protease dataset

Datasets¶

DHFR proteases

DHFR proteases

Rhomboid proteases

Rhomboid proteases

S1A serine proteases

S1A serine proteases

Download all examples in Python source code: auto_examples_python.zip

Download all examples in Jupyter notebooks: auto_examples_jupyter.zip

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