cocoatree.deconvolution.extract_xcors

cocoatree.deconvolution.extract_xcors(coevo_matrix, n_xcors=3)

Extract residue positions of XCoRs directly from the coevo_matrix

Parameters

coevo_matrix : coevolution matrix

n_xcorsint

Number of XCoRs to return

Returns

xcorslists of residue positions on the filtered MSA for each of the

n_xcors XCoR

Examples using cocoatree.deconvolution.extract_xcors

A minimal coevo analysis

A minimal coevo analysis