cocoatree.deconvolution.extract_xcors_from_ICs¶

cocoatree.deconvolution.extract_xcors_from_ICs(idpt_components, coevo_matrix)[source]¶

Extract residue positions of XCoRs from independent components

Parameters¶

idpt_components : independent components obtained from an ICA

coevo_matrix : coevolution matrix

Returns¶

xcorslists of residue positions on the filtered MSA for each of the: n_components xcor

Examples using `cocoatree.deconvolution.extract_xcors_from_ICs`¶

Perform full SCA analysis on the S1A serine protease dataset

Perform full SCA analysis on the S1A serine protease dataset