circhic.datasets.load_ccrescentus¶

circhic.datasets.load_ccrescentus()¶

Loads C. crescentus contact counts.

Returns

dictionary :

a dictionary containing:

counts: an (n, n) ndarray corresponding to the raw contact counts for C. crescentus
nbins: (l, ) ndarray containing the number of bins of all chromosomes.

Examples using `circhic.datasets.load_ccrescentus`¶

Circular Hi-C and genomic data — Circular Hi-C and genomic data¶

Zooming in chromosomal interaction domains — Zooming in chromosomal interaction domains¶

Secondary diagonal from 'distant' mode — Secondary diagonal from ‘distant’ mode¶

Raw data — Raw data¶

Square versus circular displays — Square versus circular displays¶

Using a different color map — Using a different color map¶